Class
vcfc:Breakend
A parsed bracketed VCF ALT allele representing a novel adjacency or terminus. The source expression remains in alleleValue.
Outgoing Relationships
Edges emitted from this term while building the graph and reference views.
| Relation | Target | Target Description |
|---|---|---|
| Subclass Of |
vcfc:AltAllele
|
One ordered ALT allele, identified by a positive alleleIndex in source ALT order. |
Incoming Relationships
Terms that point at this term in the generated relationship graph.
| Relation | Source | Source Description |
|---|---|---|
| Domain |
vcfc:mateBreakend
|
mate breakend |
| Range |
vcfc:mateBreakend
|
mate breakend |
| Domain |
vcfc:partnerBreakend
|
partner breakend |
| Range |
vcfc:partnerBreakend
|
partner breakend |
| Domain |
vcfc:breakendOrientation
|
breakend orientation |
| Domain |
vcfc:isSingleBreakend
|
is single breakend |
| Domain |
vcfc:isTelomereBreakend
|
is telomere breakend |
| Domain |
vcfc:breakendReplacementString
|
breakend replacement string |
| Domain |
vcfc:insertedSequence
|
inserted sequence |